STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_045270Translation elongation/initiation factor/Ribosomal, beta-barrel. (272 aa)    
Predicted Functional Partners:
PENO1_002640
Tetratricopeptide-like helical.
   
 0.947
PENO1_041260
Anaphase-promoting complex subunit 4.
   
 0.946
PENO1_077360
Anaphase-promoting complex subunit 1.
    
 0.944
PENO1_075700
Tetratricopeptide-like helical.
   
 0.944
PENO1_056340
Cullin homology; Belongs to the cullin family.
    
 0.943
PENO1_039730
Mad3/BUB1 homology region 1.
    
 0.931
PENO1_064980
Uncharacterized protein.
    
 0.869
PENO1_064990
Zinc finger, RING-type.
    
 0.869
PENO1_064290
DNA-binding HORMA.
    
 0.863
PENO1_058770
Uncharacterized protein.
    
  0.807
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.