STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_045410Peptidase T1A, proteasome beta-subunit. (295 aa)    
Predicted Functional Partners:
PENO1_042800
Proteasome subunit beta.
  
0.999
PENO1_036500
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
PENO1_036580
Proteasome subunit alpha type.
   
 0.999
PENO1_037460
Proteasome subunit beta.
   
 0.999
PENO1_086200
Proteasome subunit alpha type.
   
 0.998
PENO1_077090
Proteasome subunit alpha type.
   
 0.998
PENO1_077890
Proteasome subunit alpha type.
   
 0.998
PENO1_007670
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.998
PENO1_059490
Proteasome subunit alpha type.
   
 0.998
PENO1_037510
Proteasome subunit beta.
   
 0.998
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.