STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_049080Sin3 associated polypeptide p18. (246 aa)    
Predicted Functional Partners:
PENO1_088310
DNA-binding SAP.
   
 0.984
PENO1_101880
Nucleotide-binding, alpha-beta plait.
   
 
 0.938
PENO1_007720
Uncharacterized protein.
   
 0.915
PENO1_061090
Nucleotide-binding, alpha-beta plait.
   
 0.915
PENO1_102870
Mago nashi protein.
   
 0.905
PENO1_002840
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.895
PENO1_008180
Nucleotide-binding, alpha-beta plait.
   
 0.894
PENO1_052870
Histone-binding protein RBBP4.
   
 
 0.873
PENO1_004270
Uncharacterized protein.
     
 0.868
PENO1_083130
Nucleotide-binding, alpha-beta plait.
    
  0.824
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.