STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_038060Concanavalin A-like lectin/glucanase, subgroup. (505 aa)    
Predicted Functional Partners:
PENO1_088440
Glycoside hydrolase, superfamily.
     
 0.823
PENO1_002520
Glycoside hydrolase, superfamily.
     
 0.823
PENO1_092080
Glycoside hydrolase, superfamily.
     
 0.819
PENO1_095930
Glycoside hydrolase, superfamily.
     
 0.819
PENO1_017840
Glycoside hydrolase, family 28.
     
 0.795
PENO1_077540
Glycoside hydrolase, family 28.
     
 0.733
PENO1_080560
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
 0.725
PENO1_024290
Biotin/lipoate A/B protein ligase.
   
 0.710
PENO1_055200
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
 
 0.709
PENO1_060000
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.701
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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