STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_077880Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1435 aa)    
Predicted Functional Partners:
PENO1_088460
Piwi domain-containing protein.
   
 0.918
PENO1_015690
Uncharacterized protein; Belongs to the argonaute family.
   
 0.918
PENO1_110420
Stem cell self-renewal protein Piwi.
   
 0.867
PENO1_108800
Ribosomal protein S5 domain 2-type fold, subgroup; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.827
PENO1_091350
Ribosomal protein L19.
  
 
 0.797
PENO1_080550
Translation elongation factor EF1B/ribosomal protein S6.
   
 
 0.796
PENO1_012130
mRNA splicing factor, Cwf18; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.796
PENO1_019200
Ribonuclease CAF1.
   
 
 0.793
PENO1_028680
Ribosomal protein L32p.
  
   0.782
PENO1_099630
L51_S25_CI-B8 domain-containing protein.
   
 
 0.755
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.