STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_027170Aldolase-type TIM barrel; Belongs to the cytochrome b5 family. (498 aa)    
Predicted Functional Partners:
PENO1_090960
NADH:cytochrome b5 reductase (CBR); Belongs to the cytochrome b5 family.
   
0.842
PENO1_090970
Eukaryotic molybdopterin oxidoreductase.
   
 0.842
PENO1_012840
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
0.842
PENO1_029490
FMN-dependent dehydrogenase; Belongs to the cytochrome b5 family.
  
  
 
0.840
PENO1_097900
dTDP-4-dehydrorhamnose reductase.
   
 0.798
PENO1_069190
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 
 0.791
PENO1_022290
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.751
PENO1_089500
Cytochrome b5; Belongs to the cytochrome b5 family.
   
 0.746
PENO1_037230
L-lactate/malate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 
 0.737
PENO1_056630
Malate dehydrogenase.
   
 
 0.732
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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