STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_029570Ubiquitin system component Cue. (868 aa)    
Predicted Functional Partners:
PENO1_055190
WD_REPEATS_REGION domain-containing protein.
   
  0.527
PENO1_048170
Armadillo-like helical.
    
  0.525
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.491
PENO1_089330
Ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.457
PENO1_068100
Uncharacterized protein.
  
 
  0.452
PENO1_103000
Calcium-binding EF-hand; Belongs to the calmodulin family.
   
  0.442
PENO1_049770
Uncharacterized protein.
   
  0.442
PENO1_027460
Recoverin; Belongs to the calmodulin family.
   
  0.442
PENO1_003620
MHYT.
    
  0.435
PENO1_033410
CP-type G domain-containing protein.
   
  0.425
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.