STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_057840Regulator of chromosome condensation, RCC1. (560 aa)    
Predicted Functional Partners:
PENO1_008620
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.883
PENO1_050800
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.878
PENO1_093150
Uncharacterized protein.
    
 0.878
PENO1_099040
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.815
PENO1_038710
Histone H2A; Belongs to the histone H2A family.
    
 0.802
PENO1_089720
Small GTPase superfamily.
    
 
 0.761
PENO1_038720
Histone H2B; Belongs to the histone H2B family.
    
 0.746
PENO1_074950
RanBD1 domain-containing protein.
   
 0.717
PENO1_039950
Uncharacterized protein.
   
 0.717
PENO1_070580
Leucine-rich repeat, ribonuclease inhibitor subtype.
   
 
 0.710
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.