STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_020280Rab GDP dissociation inhibitor; Belongs to the Rab GDI family. (469 aa)    
Predicted Functional Partners:
PENO1_000100
Small GTPase superfamily, Rab type.
    
 0.980
PENO1_026180
Small GTPase superfamily, Rab type.
   
 0.978
PENO1_052650
Small GTPase superfamily, Rab type.
    
 0.965
PENO1_083110
Small GTPase superfamily, Rab type.
   
 0.958
PENO1_083100
Nuclear control of ATP synthase 2.
   
 0.958
PENO1_089720
Small GTPase superfamily.
    
 0.955
PENO1_038820
Small GTPase superfamily, Rho type.
    
 0.908
PENO1_020140
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
 0.908
PENO1_015340
Small GTPase superfamily, Rho type.
    
 0.908
PENO1_024200
Uncharacterized protein.
    
 0.802
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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