STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_019570Transcription factor. (796 aa)    
Predicted Functional Partners:
PENO1_090960
NADH:cytochrome b5 reductase (CBR); Belongs to the cytochrome b5 family.
    
  0.658
PENO1_090970
Eukaryotic molybdopterin oxidoreductase.
    
  0.658
PENO1_012840
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.658
PENO1_078400
Tetratricopeptide-like helical.
    
 0.587
PENO1_082600
Nucleotide-binding, alpha-beta plait.
    
  0.572
PENO1_065970
ANK_REP_REGION domain-containing protein.
    
 0.562
PENO1_014380
ANK_REP_REGION domain-containing protein.
    
 0.562
PENO1_046080
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.562
PENO1_002240
Zinc finger, PHD-type.
    
 0.560
PENO1_026810
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.551
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.