STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_044950Exoribonuclease, phosphorolytic domain 1. (292 aa)    
Predicted Functional Partners:
PENO1_028120
Exosome complex RNA-binding protein 1/RRP40/RRP4.
   
 0.998
PENO1_042720
Ribosomal protein L27.
   
 0.998
PENO1_033130
Exoribonuclease, phosphorolytic domain 1.
   
 0.998
PENO1_099580
Exosome complex component CSL4.
   
 0.997
PENO1_080230
Exoribonuclease, phosphorolytic domain 1.
   
 0.997
PENO1_001900
Ribonuclease II/R; Belongs to the RNR ribonuclease family.
   
 0.996
PENO1_003200
Exoribonuclease, phosphorolytic domain 1.
   
 0.996
PENO1_046260
Exoribonuclease, phosphorolytic domain 1.
   
 0.996
PENO1_046600
Sas10/Utp3/C1D.
   
 0.995
PENO1_034810
Pyruvate/Phosphoenolpyruvate kinase.
   
 0.995
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.