STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_074520Pyruvate carboxyltransferase. (645 aa)    
Predicted Functional Partners:
PENO1_020450
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
  
 
 0.985
PENO1_067390
Acetolactate synthase, small subunit.
  
 
 0.970
PENO1_057610
Dihydroxy-acid dehydratase.
  
 
 0.964
PENO1_003630
Dihydroxy-acid dehydratase.
  
 
 0.964
PENO1_098500
Aminotransferase, class IV.
  
 0.961
PENO1_084340
Aconitase/3-isopropylmalate dehydratase, swivel.
  
 
 0.959
PENO1_012320
Aminotransferase, class IV.
  
 0.952
PENO1_100290
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.944
PENO1_042870
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.944
PENO1_111090
Branched-chain amino acid aminotransferase II.
  
 0.933
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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