STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_017350Glycoside hydrolase, superfamily. (777 aa)    
Predicted Functional Partners:
PENO1_087830
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
    
 0.841
PENO1_104670
Pectin lyase fold/virulence factor.
    
  0.840
PENO1_038420
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.835
PENO1_108280
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.827
PENO1_050550
Glycoside hydrolase, superfamily; Belongs to the glycosyl hydrolase 17 family.
    
 0.822
PENO1_054400
Glycoside hydrolase, superfamily.
    
 0.819
PENO1_031040
Glycoside hydrolase, superfamily; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.819
PENO1_074760
Glucanase; Belongs to the glycosyl hydrolase family 6.
    
 0.812
PENO1_060500
Glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
     
 0.812
PENO1_029240
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
    
 0.812
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.