STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_016100Phenylalanyl-tRNA synthetase, class IIc, mitochondrial. (511 aa)    
Predicted Functional Partners:
PENO1_011610
tRNA synthetase, B5-domain.
  
 0.996
PENO1_098400
Phenylalanyl-tRNA synthetase, class IIc, alpha subunit.
   
 
 0.922
PENO1_014640
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
 
 
 
 0.797
PENO1_059580
Nucleic acid-binding, OB-fold.
  
  
 0.719
PENO1_059570
Tyrosine--tRNA ligase.
  
  
 0.713
PENO1_077350
Tyrosine--tRNA ligase.
  
  
 0.703
PENO1_094300
Uncharacterized protein.
   
 
 0.679
PENO1_061710
Uncharacterized protein.
   
 
 0.679
PENO1_078630
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.676
PENO1_078510
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.672
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.