Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PENO1_004060 | PENO1_020470 | A0A2H3IYB2 | A0A2H3IMM7 | Ribose-phosphate diphosphokinase. | Orotate phosphoribosyltransferase. | 0.917 |
PENO1_004060 | PENO1_045220 | A0A2H3IYB2 | A0A2H3IG54 | Ribose-phosphate diphosphokinase. | Ribose-phosphate diphosphokinase. | 0.834 |
PENO1_004060 | PENO1_046120 | A0A2H3IYB2 | A0A2H3IFB4 | Ribose-phosphate diphosphokinase. | Ribose-phosphate diphosphokinase. | 0.834 |
PENO1_004060 | PENO1_063800 | A0A2H3IYB2 | A0A2H3IAY5 | Ribose-phosphate diphosphokinase. | Uncharacterized protein. | 0.614 |
PENO1_004060 | PENO1_086510 | A0A2H3IYB2 | A0A2H3I4G4 | Ribose-phosphate diphosphokinase. | Aldolase-type TIM barrel. | 0.416 |
PENO1_004060 | PENO1_097240 | A0A2H3IYB2 | A0A2H3I0L5 | Ribose-phosphate diphosphokinase. | Ribose-phosphate diphosphokinase. | 0.966 |
PENO1_012840 | PENO1_020470 | A0A2H3IYP1 | A0A2H3IMM7 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Orotate phosphoribosyltransferase. | 0.857 |
PENO1_012840 | PENO1_063800 | A0A2H3IYP1 | A0A2H3IAY5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Uncharacterized protein. | 0.811 |
PENO1_012840 | PENO1_086510 | A0A2H3IYP1 | A0A2H3I4G4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Aldolase-type TIM barrel. | 0.959 |
PENO1_012840 | PENO1_089500 | A0A2H3IYP1 | A0A2H3I2H0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5; Belongs to the cytochrome b5 family. | 0.958 |
PENO1_012840 | PENO1_090960 | A0A2H3IYP1 | A0A2H3I923 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | NADH:cytochrome b5 reductase (CBR); Belongs to the cytochrome b5 family. | 0.981 |
PENO1_012840 | PENO1_090970 | A0A2H3IYP1 | A0A2H3IHD4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Eukaryotic molybdopterin oxidoreductase. | 0.982 |
PENO1_020470 | PENO1_004060 | A0A2H3IMM7 | A0A2H3IYB2 | Orotate phosphoribosyltransferase. | Ribose-phosphate diphosphokinase. | 0.917 |
PENO1_020470 | PENO1_012840 | A0A2H3IMM7 | A0A2H3IYP1 | Orotate phosphoribosyltransferase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.857 |
PENO1_020470 | PENO1_045220 | A0A2H3IMM7 | A0A2H3IG54 | Orotate phosphoribosyltransferase. | Ribose-phosphate diphosphokinase. | 0.857 |
PENO1_020470 | PENO1_046120 | A0A2H3IMM7 | A0A2H3IFB4 | Orotate phosphoribosyltransferase. | Ribose-phosphate diphosphokinase. | 0.857 |
PENO1_020470 | PENO1_063800 | A0A2H3IMM7 | A0A2H3IAY5 | Orotate phosphoribosyltransferase. | Uncharacterized protein. | 0.933 |
PENO1_020470 | PENO1_086510 | A0A2H3IMM7 | A0A2H3I4G4 | Orotate phosphoribosyltransferase. | Aldolase-type TIM barrel. | 0.985 |
PENO1_020470 | PENO1_089500 | A0A2H3IMM7 | A0A2H3I2H0 | Orotate phosphoribosyltransferase. | Cytochrome b5; Belongs to the cytochrome b5 family. | 0.804 |
PENO1_020470 | PENO1_090960 | A0A2H3IMM7 | A0A2H3I923 | Orotate phosphoribosyltransferase. | NADH:cytochrome b5 reductase (CBR); Belongs to the cytochrome b5 family. | 0.857 |
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