STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_016440Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (171 aa)    
Predicted Functional Partners:
cyn1
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
     
 0.914
PENO1_032370
Electron transfer flavoprotein, beta subunit.
  
 0.874
PENO1_039610
Electron transfer flavoprotein, alpha subunit.
  
 0.872
PENO1_068170
Thiolase-like, subgroup; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.807
PENO1_018700
Thiolase-like, subgroup.
   
 0.807
PENO1_023050
SCP2 domain-containing protein.
   
 0.807
PENO1_038300
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
  
 
 0.783
PENO1_001720
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.758
PENO1_054510
Uncharacterized protein.
   
 0.751
PENO1_032440
Carbonic anhydrase.
  
  
 0.748
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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