STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_022150WD_REPEATS_REGION domain-containing protein. (605 aa)    
Predicted Functional Partners:
PENO1_047540
Ubiquitin carboxyl-terminal hydrolase.
    
 0.992
PENO1_076220
WD_REPEATS_REGION domain-containing protein.
    
 0.980
PENO1_082600
Nucleotide-binding, alpha-beta plait.
    
 0.871
PENO1_033200
Zinc finger, PHD-finger.
   
 0.844
PENO1_064290
DNA-binding HORMA.
   
 0.823
PENO1_022160
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
 
 
  0.823
PENO1_048170
Armadillo-like helical.
   
 0.822
PENO1_022410
Zinc finger, C2H2.
    
 0.821
PENO1_039730
Mad3/BUB1 homology region 1.
   
 0.816
PENO1_100760
Histone-fold.
    
 0.814
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.