STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_079530ATPase, AAA-type, core. (394 aa)    
Predicted Functional Partners:
PENO1_080320
ATPase, AAA-type, core.
  
0.999
PENO1_056490
ATPase, AAA-type, core.
  
0.999
PENO1_014630
Cytochrome c oxidase assembly protein CtaG/Cox11.
   
0.999
PENO1_066980
Checkpoint protein Rad17/Rad24.
   
 0.996
PENO1_014650
Replication factor C subunit 1.
   
 0.996
PENO1_077430
Uncharacterized protein.
   
 0.991
PENO1_085120
DNA polymerase eta.
   
 0.991
PENO1_078370
Proliferating cell nuclear antigen, PCNA.
  
 0.989
PENO1_030420
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.989
PENO1_019000
ATPase, AAA-type, core.
   
 0.987
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.