STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_047010Tetratricopeptide-like helical. (1318 aa)    
Predicted Functional Partners:
PENO1_054960
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
  
 0.989
PENO1_086480
Uncharacterized protein.
   
 0.987
PENO1_019410
Peptidase S59, nucleoporin.
    
 0.985
PENO1_025360
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.984
PENO1_034650
Nucleoporin Nup188.
  
 0.941
PENO1_101790
Uncharacterized protein.
  
 
 
 0.923
PENO1_108870
Nucleoporin Nup54.
    
 0.901
PENO1_083210
Nucleoporin interacting component Nup93/Nic96.
  
 
 0.883
PENO1_005390
Uncharacterized protein.
  
 0.864
PENO1_022210
Uncharacterized protein.
    
 0.780
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.