STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_033490Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
PENO1_040300
Uncharacterized protein.
 
      0.900
PENO1_040290
SWIB domain-containing protein.
 
      0.889
PENO1_011620
K Homology, prokaryotic type; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.621
PENO1_110220
HEAT, type 2.
   
 
 0.601
PENO1_101020
Immunoglobulin E-set.
    
 
 0.550
PENO1_041380
Ribosomal protein S10.
    
 
 0.547
PENO1_037970
GYF.
    
 
 0.545
PENO1_027800
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.544
PENO1_048600
Leucine carboxyl methyltransferase.
    
 
 0.542
PENO1_015940
WD_REPEATS_REGION domain-containing protein.
    
 
 0.541
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.