STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_071860Tetratricopeptide-like helical. (479 aa)    
Predicted Functional Partners:
PENO1_022530
Mob1/phocein.
    
 
 0.833
PENO1_100270
Ubiquitin-conjugating enzyme, E2; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.830
PENO1_088160
SKP1 component, dimerization; Belongs to the SKP1 family.
    
 
 0.822
PENO1_085820
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.
    
   0.822
PENO1_012450
Isy1-like splicing.
    
   0.822
PENO1_089840
Cytochrome P450.
    
 0.726
PENO1_022480
Transcription factor.
    
 0.726
PENO1_014870
Fungal_trans domain-containing protein.
    
 0.726
PENO1_024650
Uncharacterized protein.
    
 
 0.671
PENO1_009570
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.628
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.