STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_071410Vacuolar protein sorting-associated protein 51. (291 aa)    
Predicted Functional Partners:
PENO1_058960
Vps53_N domain-containing protein.
    
 0.995
PENO1_026590
Vps52/Sac2.
   
 0.979
PENO1_002370
t-SNARE.
    
 0.958
PENO1_064570
Vps54 domain-containing protein.
   
 0.900
PENO1_002730
Vacuolar protein sorting-associated protein 54.
   
 0.900
PENO1_000340
t-SNARE coiled-coil homology domain-containing protein.
    
 0.884
PENO1_046070
t-SNARE.
    
 0.829
PENO1_016970
Dor1-like protein.
    
 0.811
PENO1_027450
t-SNARE; Belongs to the syntaxin family.
    
 0.810
PENO1_023830
Vacuolar protein sorting-associated protein 51.
   
 
 0.809
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.