STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_005300Uncharacterized protein. (324 aa)    
Predicted Functional Partners:
PENO1_091680
CLP1_P domain-containing protein.
   
 0.950
PENO1_055190
WD_REPEATS_REGION domain-containing protein.
   
 0.881
PENO1_048170
Armadillo-like helical.
   
 0.853
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.768
PENO1_063890
Peptidase C48, SUMO/Sentrin/Ubl1.
   
 0.758
PENO1_075030
Eukaryotic rRNA processing.
   
 
  0.742
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
  0.737
PENO1_033410
CP-type G domain-containing protein.
   
 
  0.725
PENO1_066220
Uncharacterized protein.
   
 0.716
PENO1_052910
Peptidase C48, SUMO/Sentrin/Ubl1.
   
 0.716
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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