STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_006290NAD(P)-bd_dom domain-containing protein. (264 aa)    
Predicted Functional Partners:
PENO1_092650
Translation elongation factor EF1B/ribosomal protein S6; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.822
PENO1_042070
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.699
PENO1_072490
Armadillo-like helical.
    
 
 0.642
PENO1_060640
DNA-directed RNA polymerase, dimerization.
   
 
 0.607
PENO1_080190
DNA-directed RNA polymerase, dimerization.
   
 
 0.607
PENO1_088980
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.560
PENO1_078630
Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.550
PENO1_110220
HEAT, type 2.
   
 
 0.541
PENO1_088780
Translation elongation/initiation factor/Ribosomal, beta-barrel.
   
 
 0.528
PENO1_077760
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.526
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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