STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_008400Alpha/beta hydrolase fold-3. (654 aa)    
Predicted Functional Partners:
PENO1_112280
Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase.
  
 
 0.852
PENO1_100890
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.820
PENO1_009130
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.820
PENO1_025210
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
     
 0.810
PENO1_014280
Proline racemase.
    
 0.809
PENO1_072500
Isocitrate lyase.
   
 
 0.681
PENO1_092170
Malate synthase; Belongs to the malate synthase family.
   
 
 0.679
PENO1_088430
Uncharacterized protein.
   
 
 0.671
PENO1_075080
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.661
PENO1_049570
Uncharacterized protein.
   
 
  0.660
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.