STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_005950Small GTPase superfamily, Rab type. (215 aa)    
Predicted Functional Partners:
PENO1_012970
Rho GTPase activation protein.
    
 0.966
PENO1_059930
Ras-association.
    
 0.965
PENO1_014670
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.946
PENO1_012610
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.932
PENO1_009190
Small GTPase superfamily, Ras type.
  
  
 
0.902
PENO1_099200
But2 domain-containing protein.
   
 0.896
PENO1_058770
Uncharacterized protein.
    
 0.864
PENO1_023740
Rap/ran-GAP.
    
 0.860
PENO1_085010
Sterile alpha motif, type 1.
    
 0.859
PENO1_043640
Ras GTPase-activating protein.
    
 0.856
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.