STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_043500Uncharacterized protein. (609 aa)    
Predicted Functional Partners:
PENO1_088160
SKP1 component, dimerization; Belongs to the SKP1 family.
   
 0.809
PENO1_095290
Cullin homology; Belongs to the cullin family.
    
 0.752
PENO1_045530
Cullin homology; Belongs to the cullin family.
    
 0.752
PENO1_006750
Zinc finger, RING-type.
    
 0.713
PENO1_000980
SKP1 component, POZ; Belongs to the SKP1 family.
    
 0.671
PENO1_057020
Ubiquitin supergroup.
    
 0.648
PENO1_095610
Zinc finger, AN1-type.
    
 0.630
PENO1_066210
Ubiquitin supergroup.
    
 0.630
PENO1_101810
Heat shock protein DnaJ.
    
 0.598
PENO1_076090
J domain-containing protein.
    
 0.598
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.