Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PENO1_019090 | PENO1_021820 | A0A2H3J092 | A0A2H3IKW7 | Pyoverdine biosynthesis. | TAP42-like protein. | 0.539 |
PENO1_019090 | PENO1_026230 | A0A2H3J092 | A0A2H3IJL7 | Pyoverdine biosynthesis. | Alpha-amylase, C-terminal all beta. | 0.494 |
PENO1_019090 | PENO1_031860 | A0A2H3J092 | A0A2H3IHZ6 | Pyoverdine biosynthesis. | Heme A synthase, type 2. | 0.582 |
PENO1_019090 | PENO1_057710 | A0A2H3J092 | A0A2H3IAU8 | Pyoverdine biosynthesis. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.408 |
PENO1_019090 | PENO1_099940 | A0A2H3J092 | A0A2H3I6Q4 | Pyoverdine biosynthesis. | Serine/threonine-protein phosphatase. | 0.406 |
PENO1_021820 | PENO1_019090 | A0A2H3IKW7 | A0A2H3J092 | TAP42-like protein. | Pyoverdine biosynthesis. | 0.539 |
PENO1_021820 | PENO1_099940 | A0A2H3IKW7 | A0A2H3I6Q4 | TAP42-like protein. | Serine/threonine-protein phosphatase. | 0.992 |
PENO1_026230 | PENO1_019090 | A0A2H3IJL7 | A0A2H3J092 | Alpha-amylase, C-terminal all beta. | Pyoverdine biosynthesis. | 0.494 |
PENO1_031860 | PENO1_019090 | A0A2H3IHZ6 | A0A2H3J092 | Heme A synthase, type 2. | Pyoverdine biosynthesis. | 0.582 |
PENO1_057710 | PENO1_019090 | A0A2H3IAU8 | A0A2H3J092 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Pyoverdine biosynthesis. | 0.408 |
PENO1_099940 | PENO1_019090 | A0A2H3I6Q4 | A0A2H3J092 | Serine/threonine-protein phosphatase. | Pyoverdine biosynthesis. | 0.406 |
PENO1_099940 | PENO1_021820 | A0A2H3I6Q4 | A0A2H3IKW7 | Serine/threonine-protein phosphatase. | TAP42-like protein. | 0.992 |