STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_003920TLC domain-containing protein. (387 aa)    
Predicted Functional Partners:
PENO1_008620
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.674
PENO1_027730
Uncharacterized protein.
    
 
 0.623
PENO1_063050
Peptidase C2, calpain, domain III; Belongs to the peptidase C2 family.
    
 
 0.604
PENO1_039940
Peptidase C2, calpain family; Belongs to the peptidase C2 family.
    
 
 0.604
PENO1_026810
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.601
PENO1_011630
Myotubularin-related.
   
   0.601
PENO1_066650
Uncharacterized protein.
    
   0.585
PENO1_104130
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.585
PENO1_068110
Uncharacterized protein.
    
 
 0.580
PENO1_028660
Guanylate kinase, sub-group.
    
 
 0.580
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.