STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PENO1_025150Pyridoxal phosphate-dependent decarboxylase. (1101 aa)    
Predicted Functional Partners:
PENO1_028360
Indoleamine 2,3-dioxygenase.
     
 0.921
PENO1_107890
Amine oxidase.
    
 0.916
PENO1_066260
Aspartate aminotransferase.
   
 
 0.915
PENO1_024670
Aminotransferase, class I/classII.
    
 0.910
PENO1_049540
Pyridoxal phosphate-dependent transferase, major region, subdomain 1.
   
 
 0.907
PENO1_060610
Pyridoxal phosphate-dependent transferase, major region, subdomain 2.
    
 0.906
PENO1_006170
Pyridoxal phosphate-dependent transferase, major region, subdomain 2.
   
 
 0.906
katG
Catalase-peroxidase; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
   
 
  0.903
PENO1_107040
Amine oxidase.
     
 0.902
PENO1_071730
Indoleamine 2,3-dioxygenase.
   
 
 0.902
Your Current Organism:
Penicillium sp. occitanis
NCBI taxonomy Id: 290292
Other names: P. sp. 'occitanis', Penicillium occitanis, Penicillium sp. 'occitanis'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.