STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps830S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. (132 aa)    
Predicted Functional Partners:
R1CME4_EMIHU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
R1EGX6_EMIHU
Uncharacterized protein.
  
 0.997
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
  
 0.996
R1BCK1_EMIHU
Uncharacterized protein.
   
 0.996
R1BDA5_EMIHU
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.996
R1BPS5_EMIHU
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 0.996
R1CGC7_EMIHU
40S ribosomal protein S4.
  
 0.996
R1CHH6_EMIHU
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.996
R1CXH0_EMIHU
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.996
R1DK29_EMIHU
S1-like domain-containing protein.
  
 0.996
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.