STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1BB08_EMIHUCholine dehydrogenase. (390 aa)    
Predicted Functional Partners:
R1C8H5_EMIHU
Uncharacterized protein.
    
 0.894
R1D5E2_EMIHU
Uncharacterized protein.
    
 0.876
R1B461_EMIHU
Uncharacterized protein.
    
 0.856
R1CV11_EMIHU
Uncharacterized protein.
    
 0.846
R1FU15_EMIHU
MIP-T3 domain-containing protein.
    
 0.831
R1C6Y9_EMIHU
Uncharacterized protein.
    
 0.794
R1G1Q0_EMIHU
Uncharacterized protein.
    
 0.794
R1DXI5_EMIHU
Uncharacterized protein.
    
 0.784
R1FIF3_EMIHU
Uncharacterized protein.
    
 0.784
R1FQX8_EMIHU
Cytochrome c domain-containing protein.
  
 
 0.772
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.