STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1BQ42_EMIHU2-Hacid_dh_C domain-containing protein. (169 aa)    
Predicted Functional Partners:
rpl27
50S ribosomal protein L27, chloroplastic.
   
   0.766
R1D708_EMIHU
Uncharacterized protein.
    
   0.749
R1DMK8_EMIHU
Uncharacterized protein.
    
   0.749
R1DUS7_EMIHU
Uncharacterized protein.
    
   0.749
R1DHE9_EMIHU
C2H2-type domain-containing protein.
    
 
 0.723
rpl22
50S ribosomal protein L22, chloroplastic; This protein binds specifically to 23S rRNA; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.694
R1DZW4_EMIHU
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.694
R1BFB1_EMIHU
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.692
R1CYL8_EMIHU
Uncharacterized protein.
    
 0.692
R1D3X5_EMIHU
DNA-lyase.
    
 0.692
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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