STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1BWB9_EMIHUtRNA pseudouridine synthase. (131 aa)    
Predicted Functional Partners:
R1BJ89_EMIHU
Uncharacterized protein.
   
    0.693
R1DLL0_EMIHU
WD_REPEATS_REGION domain-containing protein.
   
  
 0.634
R1EIS3_EMIHU
Uncharacterized protein.
   
    0.622
R1BYU8_EMIHU
Uncharacterized protein.
     
 0.621
R1FSU3_EMIHU
IGPS domain-containing protein.
     
 0.621
R1DCK2_EMIHU
Brix domain-containing protein.
   
    0.615
R1C2B5_EMIHU
Tryptophane synthase.
     
 0.614
R1BLV8_EMIHU
Uncharacterized protein.
   
    0.576
R1G203_EMIHU
Uncharacterized protein.
   
    0.576
R1CTV8_EMIHU
RPOLD domain-containing protein.
  
  
 0.575
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.