STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1C175_EMIHUUncharacterized protein. (531 aa)    
Predicted Functional Partners:
R1EI71_EMIHU
RED_N domain-containing protein.
   
 0.996
R1BLS8_EMIHU
MFAP1 domain-containing protein.
   
 0.977
R1BTZ3_EMIHU
MFAP1 domain-containing protein.
   
 0.977
R1F4T4_EMIHU
MFAP1 domain-containing protein.
   
 0.977
R1E550_EMIHU
U1-type domain-containing protein.
    
 0.965
R1F3N7_EMIHU
Uncharacterized protein.
   
 0.963
R1FRG6_EMIHU
SF3b1 domain-containing protein.
   
 
 0.942
LSM8
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
   0.917
R1D009_EMIHU
J domain-containing protein.
   
 
 0.916
R1DUR0_EMIHU
Uncharacterized protein.
   
 
 0.916
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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