R1CH18_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1CH18_EMIHU

Importin N-terminal domain-containing protein. (1029 aa)

Predicted Functional Partners:

R1DRX3_EMIHU

0.856

RAN-2

0.856

RAN-1

0.856

R1F4P9_EMIHU

0.775

R1FID3_EMIHU

0.770

R1DBT8_EMIHU

0.768

R1EIB3_EMIHU

0.768

R1D035_EMIHU

0.720

R1DEE1_EMIHU

0.720

R1DR71_EMIHU

0.720

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1CH18_EMIHU	R1D035_EMIHU	R1CH18	R1D035	Importin N-terminal domain-containing protein.	Uncharacterized protein.	0.720
R1CH18_EMIHU	R1DBT8_EMIHU	R1CH18	R1DBT8	Importin N-terminal domain-containing protein.	IBB domain-containing protein.	0.768
R1CH18_EMIHU	R1DEE1_EMIHU	R1CH18	R1DEE1	Importin N-terminal domain-containing protein.	Uncharacterized protein.	0.720
R1CH18_EMIHU	R1DR71_EMIHU	R1CH18	R1DR71	Importin N-terminal domain-containing protein.	IBB domain-containing protein.	0.720
R1CH18_EMIHU	R1DRX3_EMIHU	R1CH18	R1DRX3	Importin N-terminal domain-containing protein.	Uncharacterized protein.	0.856
R1CH18_EMIHU	R1EIB3_EMIHU	R1CH18	R1EIB3	Importin N-terminal domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.768
R1CH18_EMIHU	R1F4P9_EMIHU	R1CH18	R1F4P9	Importin N-terminal domain-containing protein.	IBB domain-containing protein.	0.775
R1CH18_EMIHU	R1FID3_EMIHU	R1CH18	R1FID3	Importin N-terminal domain-containing protein.	IBB domain-containing protein.	0.770
R1CH18_EMIHU	RAN-1	R1CH18	R1FGT1	Importin N-terminal domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.856
R1CH18_EMIHU	RAN-2	R1CH18	R1DWC3	Importin N-terminal domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.856
R1D035_EMIHU	R1CH18_EMIHU	R1D035	R1CH18	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.720
R1D035_EMIHU	R1DRX3_EMIHU	R1D035	R1DRX3	Uncharacterized protein.	Uncharacterized protein.	0.544
R1D035_EMIHU	RAN-1	R1D035	R1FGT1	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.544
R1D035_EMIHU	RAN-2	R1D035	R1DWC3	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.544
R1DBT8_EMIHU	R1CH18_EMIHU	R1DBT8	R1CH18	IBB domain-containing protein.	Importin N-terminal domain-containing protein.	0.768
R1DBT8_EMIHU	R1DRX3_EMIHU	R1DBT8	R1DRX3	IBB domain-containing protein.	Uncharacterized protein.	0.544
R1DBT8_EMIHU	RAN-1	R1DBT8	R1FGT1	IBB domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.544
R1DBT8_EMIHU	RAN-2	R1DBT8	R1DWC3	IBB domain-containing protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.544
R1DEE1_EMIHU	R1CH18_EMIHU	R1DEE1	R1CH18	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.720
R1DEE1_EMIHU	R1DRX3_EMIHU	R1DEE1	R1DRX3	Uncharacterized protein.	Uncharacterized protein.	0.544