STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1D2F6_EMIHUPutative long-chain-fatty-acid-CoA ligase. (629 aa)    
Predicted Functional Partners:
R1D708_EMIHU
Uncharacterized protein.
    
   0.764
R1DCW1_EMIHU
Uncharacterized protein.
   
   0.723
R1CBY3_EMIHU
AKAP7_NLS domain-containing protein.
    
   0.722
R1F2T4_EMIHU
Uncharacterized protein.
    
 
 0.679
R1FFE3_EMIHU
Mitochondrial/chloroplast ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
    
 
 0.679
rpl21
50S ribosomal protein L21, chloroplastic; This protein binds to 23S rRNA.
    
   0.666
R1BHH6_EMIHU
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
   0.666
R1E0M5_EMIHU
L51_S25_CI-B8 domain-containing protein.
    
   0.666
R1FPZ0_EMIHU
Uncharacterized protein.
    
   0.666
R1FXR7_EMIHU
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
   0.666
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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