STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBA1Ubiquitin-activating enzyme E1. (1052 aa)    
Predicted Functional Partners:
R1G200_EMIHU
Autophagy-related protein 3.
    
 0.854
R1DBE9_EMIHU
Ubiquitin-like domain-containing protein.
    
 0.802
R1FDK0_EMIHU
Ubiquitin-like domain-containing protein.
    
 0.802
R1FF22_EMIHU
Ubiquitin-like domain-containing protein.
    
 0.802
R1DL76_EMIHU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.800
R1F1H8_EMIHU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.800
R1DET7_EMIHU
HECT domain-containing protein.
   
 0.796
R1DM12_EMIHU
Uncharacterized protein.
   
 0.796
R1D292_EMIHU
ThiF domain-containing protein.
     
 0.793
R1B340_EMIHU
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.791
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.