STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1D808_EMIHUAA_TRNA_LIGASE_II domain-containing protein. (362 aa)    
Predicted Functional Partners:
R1BL76_EMIHU
tRNA-binding domain-containing protein.
  
 
 0.859
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
   
 
 0.808
rpl27
50S ribosomal protein L27, chloroplastic.
  
 
 0.779
R1FXR7_EMIHU
50S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.776
rps12
30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity).
   
 
 0.774
R1DS29_EMIHU
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.766
R1E557_EMIHU
tRNA-synt_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.766
R1B932_EMIHU
Putative valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.765
R1DMK8_EMIHU
Uncharacterized protein.
  
 
 0.756
rps16
30S ribosomal protein S16, chloroplastic.
  
 
 0.750
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.