STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAV2Voltage-gated Ca2+ channel, alpha subunit. (1302 aa)    
Predicted Functional Partners:
R1DLN8_EMIHU
VWFA domain-containing protein.
   
 0.865
R1DA93_EMIHU
Uncharacterized protein.
   
 0.852
R1C5Q5_EMIHU
WD_REPEATS_REGION domain-containing protein.
    
 0.843
R1EAP6_EMIHU
GRAM domain-containing protein.
   
 0.725
R1B746_EMIHU
Uncharacterized protein.
    
 0.672
R1B750_EMIHU
Uncharacterized protein.
    
 0.672
CTN2
Centrin.
    
 
 0.547
ctn1
Centrin.
    
 
 0.547
R1C8H5_EMIHU
Uncharacterized protein.
    
 0.545
R1E1S7_EMIHU
Uncharacterized protein.
      
 0.520
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.