STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lhcf34_2Light harvesting protein. (171 aa)    
Predicted Functional Partners:
Lhcf45_2
Light harvesting protein.
  
     0.470
Lhcf2
Light harvesting protein.
  
     0.462
R1DKL5_EMIHU
Protein kinase domain-containing protein.
  
     0.461
R1DMP5_EMIHU
Uncharacterized protein.
  
     0.453
R1FCC4_EMIHU
Uncharacterized protein.
  
     0.450
Lhcf3
Light harvesting protein.
  
     0.435
R1G2T3_EMIHU
Uncharacterized protein.
  
     0.427
R1DEH5_EMIHU
DUF4033 domain-containing protein.
  
     0.425
R1BY38_EMIHU
DUF1995 domain-containing protein.
  
     0.424
R1D764_EMIHU
DUF4033 domain-containing protein.
  
     0.423
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.