STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1DDB9_EMIHUUncharacterized protein. (510 aa)    
Predicted Functional Partners:
R1EJA8_EMIHU
Nuclear cap-binding protein subunit 2.
   
 
 0.787
R1CUK2_EMIHU
Spt5-NGN domain-containing protein.
    
 0.760
R1CWW1_EMIHU
Uncharacterized protein.
    
 0.760
R1E0I9_EMIHU
Transcription elongation factor SPT5.
    
 0.760
R1E0P5_EMIHU
DUF2236 domain-containing protein.
    
  0.717
R1DNK8_EMIHU
RPOL4c domain-containing protein.
    
 0.716
R1D8X8_EMIHU
MAT1 domain-containing protein.
     
 0.686
R1BD52_EMIHU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.672
R1E4U8_EMIHU
Uncharacterized protein.
    
  0.665
R1D462_EMIHU
RPOLD domain-containing protein.
   
 0.663
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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