Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED6 | R1DDD1_EMIHU | R1D9N1 | R1DDD1 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | U-box domain-containing protein. | 0.507 |
MED6 | R1F588_EMIHU | R1D9N1 | R1F588 | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
R1BFD2_EMIHU | R1CQG0_EMIHU | R1BFD2 | R1CQG0 | FHA domain-containing protein. | Uncharacterized protein. | 0.978 |
R1BFD2_EMIHU | R1CRE7_EMIHU | R1BFD2 | R1CRE7 | FHA domain-containing protein. | AAA_23 domain-containing protein. | 0.978 |
R1BFD2_EMIHU | R1DDD1_EMIHU | R1BFD2 | R1DDD1 | FHA domain-containing protein. | U-box domain-containing protein. | 0.588 |
R1BFD2_EMIHU | R1DHH1_EMIHU | R1BFD2 | R1DHH1 | FHA domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.846 |
R1BFD2_EMIHU | R1DJL6_EMIHU | R1BFD2 | R1DJL6 | FHA domain-containing protein. | Uncharacterized protein. | 0.846 |
R1BFD2_EMIHU | R1EKP5_EMIHU | R1BFD2 | R1EKP5 | FHA domain-containing protein. | Uncharacterized protein. | 0.846 |
R1BFD2_EMIHU | R1FJ09_EMIHU | R1BFD2 | R1FJ09 | FHA domain-containing protein. | Mre11_DNA_bind domain-containing protein. | 0.986 |
R1BFD2_EMIHU | R1FKA0_EMIHU | R1BFD2 | R1FKA0 | FHA domain-containing protein. | FHA domain-containing protein. | 0.900 |
R1CQG0_EMIHU | R1BFD2_EMIHU | R1CQG0 | R1BFD2 | Uncharacterized protein. | FHA domain-containing protein. | 0.978 |
R1CQG0_EMIHU | R1CRE7_EMIHU | R1CQG0 | R1CRE7 | Uncharacterized protein. | AAA_23 domain-containing protein. | 0.472 |
R1CQG0_EMIHU | R1DDD1_EMIHU | R1CQG0 | R1DDD1 | Uncharacterized protein. | U-box domain-containing protein. | 0.497 |
R1CQG0_EMIHU | R1DHH1_EMIHU | R1CQG0 | R1DHH1 | Uncharacterized protein. | 3'-5' exonuclease domain-containing protein. | 0.832 |
R1CQG0_EMIHU | R1DJL6_EMIHU | R1CQG0 | R1DJL6 | Uncharacterized protein. | Uncharacterized protein. | 0.832 |
R1CQG0_EMIHU | R1EKP5_EMIHU | R1CQG0 | R1EKP5 | Uncharacterized protein. | Uncharacterized protein. | 0.832 |
R1CQG0_EMIHU | R1FJ09_EMIHU | R1CQG0 | R1FJ09 | Uncharacterized protein. | Mre11_DNA_bind domain-containing protein. | 0.998 |
R1CQG0_EMIHU | R1FKA0_EMIHU | R1CQG0 | R1FKA0 | Uncharacterized protein. | FHA domain-containing protein. | 0.978 |
R1CRE7_EMIHU | R1BFD2_EMIHU | R1CRE7 | R1BFD2 | AAA_23 domain-containing protein. | FHA domain-containing protein. | 0.978 |
R1CRE7_EMIHU | R1CQG0_EMIHU | R1CRE7 | R1CQG0 | AAA_23 domain-containing protein. | Uncharacterized protein. | 0.472 |
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