STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lhcf48Light harvesting protein. (241 aa)    
Predicted Functional Partners:
Lhcf71
Light harvesting protein.
  
  
  0.951
Lhcf45_2
Light harvesting protein.
  
  
 
0.909
Lhcf8
Light harvesting protein.
     
  0.900
BET3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.877
BET5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.867
R1DE25_EMIHU
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.865
TRS85
Trafficking protein particle complex 8.
    
 0.863
R1F9F4_EMIHU
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.856
TRS31
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.849
TRS33
Trafficking protein particle complex 6.
    
 0.847
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.