STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fpg3-1Putative formamidopyrimidine-DNA glycosylase. (347 aa)    
Predicted Functional Partners:
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
  
  
 0.540
R1E8I7_EMIHU
XPGN domain-containing protein.
  
  
 0.540
R1EBG2_EMIHU
Uncharacterized protein.
  
  
 0.540
R1CEM6_EMIHU
A/G-specific adenine DNA glycosylase, mutY.
  
  
 0.536
R1DKZ3_EMIHU
Uncharacterized protein.
   
  
 0.520
R1D4U7_EMIHU
Dephospho-CoA kinase.
  
  
 0.516
R1DX43_EMIHU
Uncharacterized protein.
  
  
 0.516
R1E7W2_EMIHU
Uncharacterized protein.
  
  
 0.516
R1FH65_EMIHU
Uncharacterized protein.
  
  
 0.516
R1FWJ7_EMIHU
Uncharacterized protein.
  
  
 0.516
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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