STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1DKI3_EMIHUPutative abortive infection protein. (128 aa)    
Predicted Functional Partners:
R1DPL1_EMIHU
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.989
R1E3J8_EMIHU
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.986
R1DER2_EMIHU
Uncharacterized protein.
     
 0.981
R1DES7_EMIHU
Uncharacterized protein.
     
 0.981
R1CYJ7_EMIHU
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.963
R1E1B2_EMIHU
Abhydrolase_3 domain-containing protein.
     
 0.901
R1EQE2_EMIHU
Abhydrolase_3 domain-containing protein.
     
 0.901
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.829
Ras1-2
Ras family GTPase.
    
 0.762
R1FQP2_EMIHU
Uncharacterized protein.
    
 0.762
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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