R1DT54_EMIHU protein (Emiliania huxleyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

R1DT54_EMIHU

Dodecenoyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (507 aa)

Predicted Functional Partners:

ACAT1

0.886

R1D0K6_EMIHU

0.886

R1DMC2_EMIHU

0.763

R1ENS0_EMIHU

0.763

R1FQ80_EMIHU

0.760

A0A0D3JSQ3

0.694

R1F306_EMIHU

0.694

R1FP67_EMIHU

0.694

R1DMK8_EMIHU

0.588

R1BH74_EMIHU

0.584

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D3JSQ3	ACAT1	A0A0D3JSQ3	R1C8R5	Uncharacterized protein.	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.731
A0A0D3JSQ3	R1BH74_EMIHU	A0A0D3JSQ3	R1BH74	Uncharacterized protein.	Glutaryl-CoA dehydrogenase.	0.755
A0A0D3JSQ3	R1D0K6_EMIHU	A0A0D3JSQ3	R1D0K6	Uncharacterized protein.	Putative acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.731
A0A0D3JSQ3	R1DMC2_EMIHU	A0A0D3JSQ3	R1DMC2	Uncharacterized protein.	Thiolase_C domain-containing protein.	0.731
A0A0D3JSQ3	R1DT54_EMIHU	A0A0D3JSQ3	R1DT54	Uncharacterized protein.	Dodecenoyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.694
A0A0D3JSQ3	R1ENS0_EMIHU	A0A0D3JSQ3	R1ENS0	Uncharacterized protein.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.731
A0A0D3JSQ3	R1F306_EMIHU	A0A0D3JSQ3	R1F306	Uncharacterized protein.	Non-specific lipid transfer protein.	0.883
A0A0D3JSQ3	R1FP67_EMIHU	A0A0D3JSQ3	R1FP67	Uncharacterized protein.	Uncharacterized protein.	0.883
A0A0D3JSQ3	R1FQ80_EMIHU	A0A0D3JSQ3	R1FQ80	Uncharacterized protein.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.774
ACAT1	A0A0D3JSQ3	R1C8R5	A0A0D3JSQ3	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.731
ACAT1	R1BH74_EMIHU	R1C8R5	R1BH74	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Glutaryl-CoA dehydrogenase.	0.722
ACAT1	R1D0K6_EMIHU	R1C8R5	R1D0K6	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Putative acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.900
ACAT1	R1DT54_EMIHU	R1C8R5	R1DT54	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Dodecenoyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.886
ACAT1	R1F306_EMIHU	R1C8R5	R1F306	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Non-specific lipid transfer protein.	0.731
ACAT1	R1FP67_EMIHU	R1C8R5	R1FP67	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Uncharacterized protein.	0.731
ACAT1	R1FQ80_EMIHU	R1C8R5	R1FQ80	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.931
R1BH74_EMIHU	A0A0D3JSQ3	R1BH74	A0A0D3JSQ3	Glutaryl-CoA dehydrogenase.	Uncharacterized protein.	0.755
R1BH74_EMIHU	ACAT1	R1BH74	R1C8R5	Glutaryl-CoA dehydrogenase.	Acetyl-CoA acetyl transferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.722
R1BH74_EMIHU	R1D0K6_EMIHU	R1BH74	R1D0K6	Glutaryl-CoA dehydrogenase.	Putative acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.	0.539
R1BH74_EMIHU	R1DMC2_EMIHU	R1BH74	R1DMC2	Glutaryl-CoA dehydrogenase.	Thiolase_C domain-containing protein.	0.707