Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
G6PI1 | PYC | R1FXL3 | R1D0C2 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Pyruvate carboxylase. | 0.495 |
G6PI1 | PYC1 | R1FXL3 | R1DFR1 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.495 |
G6PI1 | R1BAE6_EMIHU | R1FXL3 | R1BAE6 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Triosephosphate isomerase. | 0.944 |
G6PI1 | R1BGG4_EMIHU | R1FXL3 | R1BGG4 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Triosephosphate isomerase. | 0.944 |
G6PI1 | R1BRQ8_EMIHU | R1FXL3 | R1BRQ8 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Enolase. | 0.737 |
G6PI1 | R1D5G4_EMIHU | R1FXL3 | R1D5G4 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Uncharacterized protein. | 0.737 |
G6PI1 | R1DQ51_EMIHU | R1FXL3 | R1DQ51 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Uncharacterized protein. | 0.737 |
G6PI1 | R1DU12_EMIHU | R1FXL3 | R1DU12 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Phosphoglycerate mutase. | 0.449 |
G6PI1 | TIM | R1FXL3 | R1CNI7 | Glucose-6-phosphate isomerase; Belongs to the GPI family. | Triosephosphate isomerase. | 0.944 |
PYC | G6PI1 | R1D0C2 | R1FXL3 | Pyruvate carboxylase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.495 |
PYC | R1BAE6_EMIHU | R1D0C2 | R1BAE6 | Pyruvate carboxylase. | Triosephosphate isomerase. | 0.577 |
PYC | R1BGG4_EMIHU | R1D0C2 | R1BGG4 | Pyruvate carboxylase. | Triosephosphate isomerase. | 0.577 |
PYC | R1DKS4_EMIHU | R1D0C2 | R1DKS4 | Pyruvate carboxylase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.495 |
PYC | R1DU12_EMIHU | R1D0C2 | R1DU12 | Pyruvate carboxylase. | Phosphoglycerate mutase. | 0.421 |
PYC | TIM | R1D0C2 | R1CNI7 | Pyruvate carboxylase. | Triosephosphate isomerase. | 0.639 |
PYC1 | G6PI1 | R1DFR1 | R1FXL3 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.495 |
PYC1 | R1BAE6_EMIHU | R1DFR1 | R1BAE6 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Triosephosphate isomerase. | 0.608 |
PYC1 | R1BGG4_EMIHU | R1DFR1 | R1BGG4 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Triosephosphate isomerase. | 0.608 |
PYC1 | R1DKS4_EMIHU | R1DFR1 | R1DKS4 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.495 |
PYC1 | R1DU12_EMIHU | R1DFR1 | R1DU12 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Phosphoglycerate mutase. | 0.421 |
page 1 of 5