STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPMT1Protoporphyrin IX methyltransferase. (262 aa)    
Predicted Functional Partners:
R1F8J6_EMIHU
Magnesium chelatase H subunit.
 
 
 0.964
R1BIU3_EMIHU
VWFA domain-containing protein.
  
 
 0.958
MPMT1
Protoporphyrin IX methyltransferase.
  
  
 
0.900
R1C779_EMIHU
Uncharacterized protein.
 
  
 0.744
R1D8G9_EMIHU
Magnesium chelatase subunit.
 
  
 0.687
CPO
Coproporphyrinogen oxidase.
   
  
 0.677
R1G6V1_EMIHU
Coproporphyrinogen oxidase.
   
  
 0.677
R1E674_EMIHU
Uncharacterized protein.
  
  
 0.612
UROD3
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
   
  
 0.590
UROD2
Uroporphyrinogen decarboxylase.
   
  
 0.589
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.