STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R1E6G9_EMIHUABC transporter domain-containing protein. (400 aa)    
Predicted Functional Partners:
rpl27
50S ribosomal protein L27, chloroplastic.
   
 
 0.566
R1DVJ5_EMIHU
Uncharacterized protein.
   
 
 0.556
R1FGI1_EMIHU
Ribosomal_L23eN domain-containing protein.
   
 
 0.550
R1BP93_EMIHU
Uncharacterized protein.
   
   0.546
rps16
30S ribosomal protein S16, chloroplastic.
  
   0.528
R1EGX6_EMIHU
Uncharacterized protein.
   
   0.528
R1DMK8_EMIHU
Uncharacterized protein.
   
 
 0.526
R1E5H5_EMIHU
Uncharacterized protein.
   
   0.503
rpl31
50S ribosomal protein L31, chloroplastic; Binds the 23S rRNA.
    
   0.501
R1EJA0_EMIHU
S1 motif domain-containing protein.
   
 0.491
Your Current Organism:
Emiliania huxleyi
NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.